Ionic run ios build error

Hi!
I am usinf ionic framework with Phonegap. And I am creating 2 platforms - Android and iOS. Android works well with emulator as well as device. But I have a problem with iOS.
If I set certificate and keys for iOS project and them run project from command line by firing following command :

$ionic run ios

Then, ionic changes my saved settings from build configuration of project. And it causes build error. Any solution for this?
||==========================
Specifications :
OS : MAC
Ionic CLI version : 1.0.14
Cordova : 3.5.0-0.2.4
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Where are you making these changes?

AFAIK, ios has always been pretty difficult to work with from the command line. This goes back to when cordova first introduced the CLI.

Do you have ios-sim and ios-deploy installed?

See Inline

Where are you making these changes?
I set build configuration information using xCode. In the build configuration - BuildSettings/Code Signing/Provision9ing Profile, Code Signing identity and bundle identifier.

AFAIK, ios has always been pretty difficult to work with from the command line. This goes back to when cordova first introduced the CLI.

Do you have ios-sim and ios-deploy installed?
Yes, I have ios-deploy (1.0.8) and ios-sim (1.9.0) both installed.